dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000227_1|CGC3
Gene ID: MGYG000000227_00468
Location and strand information: 461785 - 463092 (+)
Family: 2.A.3.8.12
Protein type: TC
Protein description: Serine/threonine exchanger SteT

Gene clsuter ID: MGYG000000227_1|CGC3
Gene ID: MGYG000000227_00469
Location and strand information: 463137 - 464024 (-)
Family: 3.A.1.1.29
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000000227_1|CGC3
Gene ID: MGYG000000227_00470
Location and strand information: 464043 - 464996 (-)
Family: 3.A.1.1.10
Protein type: TC
Protein description: putative multiple-sugar transport system permease YteP

Gene clsuter ID: MGYG000000227_1|CGC3
Gene ID: MGYG000000227_00471
Location and strand information: 465036 - 466553 (-)
Family: 3.A.1.1.10
Protein type: TC
Protein description: Lipoprotein LipO

Gene clsuter ID: MGYG000000227_1|CGC3
Gene ID: MGYG000000227_00472
Location and strand information: 466652 - 469234 (-)
Family: PL26
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.599
Protein molecular weight: 96974.95
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000227_1|CGC3
Gene ID: MGYG000000227_00473
Location and strand information: 469417 - 471423 (-)
Family: GH42
Protein type: CAZyme
Protein description: Beta-galactosidase YesZ
Protein isoelectric point: 6.5887
Protein molecular weight: 75161.63
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000227_1|CGC3
Gene ID: MGYG000000227_00474
Location and strand information: 471420 - 472061 (-)
Family: CE12
Protein type: CAZyme
Protein description: putative rhamnogalacturonan acetylesterase YesY
Protein isoelectric point: 5.6616
Protein molecular weight: 24347.65
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000227_1|CGC3
Gene ID: MGYG000000227_00475
Location and strand information: 472237 - 472536 (-)
Family: CE12
Protein type: CAZyme
Protein description: Rhamnogalacturonan acetylesterase RhgT
Protein isoelectric point: 5.8391
Protein molecular weight: 11295.85
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000227_1|CGC3
Gene ID: MGYG000000227_00476
Location and strand information: 472658 - 474526 (-)
Family: CE12|CBM35|PL11_1|CBM2|PL11|CBM13
Protein type: CAZyme
Protein description: Rhamnogalacturonan endolyase YesW
Protein isoelectric point: 6.1143
Protein molecular weight: 67802.09
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000227_1|CGC3
Gene ID: MGYG000000227_00477
Location and strand information: 474640 - 475311 (-)
Family: 9.B.28.1.5
Protein type: TC
Protein description: putative protein YesV

Gene clsuter ID: MGYG000000227_1|CGC3
Gene ID: MGYG000000227_00478
Location and strand information: 475332 - 476024 (-)
Family: null
Protein type: null
Protein description: putative protein YesU

Gene clsuter ID: MGYG000000227_1|CGC3
Gene ID: MGYG000000227_00479
Location and strand information: 476011 - 476727 (-)
Family: CE12
Protein type: CAZyme
Protein description: Rhamnogalacturonan acetylesterase RhgT
Protein isoelectric point: 5.1152
Protein molecular weight: 26435.74
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000227_1|CGC3
Gene ID: MGYG000000227_00480
Location and strand information: 476741 - 479038 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional regulator YesS

Gene clsuter ID: MGYG000000227_1|CGC3
Gene ID: MGYG000000227_00481
Location and strand information: 479085 - 480119 (-)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YesR
Protein isoelectric point: 5.0147
Protein molecular weight: 38948.06
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000227_1|CGC3
Gene ID: MGYG000000227_00482
Location and strand information: 480138 - 481025 (-)
Family: 3.A.1.1.11
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000000227_1|CGC3
Gene ID: MGYG000000227_00483
Location and strand information: 481029 - 481928 (-)
Family: 3.A.1.1.11
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000000227_1|CGC3
Gene ID: MGYG000000227_00484
Location and strand information: 481977 - 483275 (-)
Family: SBP_bac_1
Protein type: STP
Protein description: Putative ABC transporter substrate-binding protein YesO

Gene clsuter ID: MGYG000000227_1|CGC3
Gene ID: MGYG000000227_00485
Location and strand information: 483427 - 484605 (-)
Family: HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000000227_1|CGC3
Gene ID: MGYG000000227_00486
Location and strand information: 484605 - 486344 (-)
Family: 9.B.33.1.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000227_1|CGC3
Gene ID: MGYG000000227_00487
Location and strand information: 486357 - 486653 (-)
Family: 9.B.28.1.5
Protein type: TC
Protein description: putative protein YesV

Gene clsuter ID: MGYG000000227_1|CGC3
Gene ID: MGYG000000227_00488
Location and strand information: 486650 - 487000 (-)
Family: 9.B.28.1.5
Protein type: TC
Protein description: putative protein YesV

Gene clsuter ID: MGYG000000227_1|CGC3
Gene ID: MGYG000000227_00489
Location and strand information: 487150 - 488217 (-)
Family: 3.A.1.6.1
Protein type: TC
Protein description: Sulfate/thiosulfate import ATP-binding protein CysA

Gene clsuter ID: MGYG000000227_1|CGC3
Gene ID: MGYG000000227_00490
Location and strand information: 488222 - 489073 (-)
Family: 3.A.1.6.1
Protein type: TC
Protein description: Sulfate transport system permease protein CysW

Gene clsuter ID: MGYG000000227_1|CGC3
Gene ID: MGYG000000227_00491
Location and strand information: 489079 - 489843 (-)
Family: 3.A.1.6.1
Protein type: TC
Protein description: Sulfate transport system permease protein CysT

Gene clsuter ID: MGYG000000227_1|CGC3
Gene ID: MGYG000000227_00492
Location and strand information: 489940 - 490965 (-)
Family: 3.A.1.6.1
Protein type: TC
Protein description: Sulfate-binding protein

Gene clsuter ID: MGYG000000227_1|CGC3
Gene ID: MGYG000000227_00493
Location and strand information: 491268 - 493028 (-)
Family: null
Protein type: null
Protein description: Glutathione hydrolase proenzyme

Gene clsuter ID: MGYG000000227_1|CGC3
Gene ID: MGYG000000227_00494
Location and strand information: 493356 - 493973 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000227_1|CGC3
Gene ID: MGYG000000227_00495
Location and strand information: 493986 - 494984 (+)
Family: 2.A.20.1.7
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000227_1|CGC3
Gene ID: MGYG000000227_00496
Location and strand information: 495097 - 495843 (+)
Family: 9.A.10.1.1
Protein type: TC
Protein description: Stage II sporulation protein SA

Gene clsuter ID: MGYG000000227_1|CGC3
Gene ID: MGYG000000227_00497
Location and strand information: 495840 - 496016 (+)
Family: null
Protein type: null
Protein description: Stage II sporulation protein SB

Gene clsuter ID: MGYG000000227_1|CGC3
Gene ID: MGYG000000227_00498
Location and strand information: 496316 - 497584 (-)
Family: 2.A.1.14.33
Protein type: TC
Protein description: Hexuronate transporter

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000227_00468	Serine/threonine exchanger SteT	TC	461785	463092	+	2.A.3.8.12
MGYG000000227_00469	L-arabinose transport system permease protein AraQ	TC	463137	464024	-	3.A.1.1.29
MGYG000000227_00470	putative multiple-sugar transport system permease YteP	TC	464043	464996	-	3.A.1.1.10
MGYG000000227_00471	Lipoprotein LipO	TC	465036	466553	-	3.A.1.1.10
MGYG000000227_00472	hypothetical protein	CAZyme	466652	469234	-	PL26
MGYG000000227_00473	Beta-galactosidase YesZ	CAZyme	469417	471423	-	GH42
MGYG000000227_00474	putative rhamnogalacturonan acetylesterase YesY	CAZyme	471420	472061	-	CE12
MGYG000000227_00475	Rhamnogalacturonan acetylesterase RhgT	CAZyme	472237	472536	-	CE12
MGYG000000227_00476	Rhamnogalacturonan endolyase YesW	CAZyme	472658	474526	-	CE12\| CBM35\| PL11_1\| CBM2\| PL11\| CBM13
MGYG000000227_00477	putative protein YesV	TC	474640	475311	-	9.B.28.1.5
MGYG000000227_00478	putative protein YesU	null	475332	476024	-	DUF1961
MGYG000000227_00479	Rhamnogalacturonan acetylesterase RhgT	CAZyme	476011	476727	-	CE12
MGYG000000227_00480	HTH-type transcriptional regulator YesS	TF	476741	479038	-	HTH_AraC+HTH_AraC
MGYG000000227_00481	Unsaturated rhamnogalacturonyl hydrolase YesR	CAZyme	479085	480119	-	GH105
MGYG000000227_00482	L-arabinose transport system permease protein AraQ	TC	480138	481025	-	3.A.1.1.11
MGYG000000227_00483	Lactose transport system permease protein LacF	TC	481029	481928	-	3.A.1.1.11
MGYG000000227_00484	Putative ABC transporter substrate-binding protein YesO	STP	481977	483275	-	SBP_bac_1
MGYG000000227_00485	HTH-type transcriptional activator RhaR	TF	483427	484605	-	HTH_AraC
MGYG000000227_00486	hypothetical protein	TC	484605	486344	-	9.B.33.1.1
MGYG000000227_00487	putative protein YesV	TC	486357	486653	-	9.B.28.1.5
MGYG000000227_00488	putative protein YesV	TC	486650	487000	-	9.B.28.1.5
MGYG000000227_00489	Sulfate/thiosulfate import ATP-binding protein CysA	TC	487150	488217	-	3.A.1.6.1
MGYG000000227_00490	Sulfate transport system permease protein CysW	TC	488222	489073	-	3.A.1.6.1
MGYG000000227_00491	Sulfate transport system permease protein CysT	TC	489079	489843	-	3.A.1.6.1
MGYG000000227_00492	Sulfate-binding protein	TC	489940	490965	-	3.A.1.6.1
MGYG000000227_00493	Glutathione hydrolase proenzyme	null	491268	493028	-	G_glu_transpept
MGYG000000227_00494	hypothetical protein	null	493356	493973	+	PhoU_div
MGYG000000227_00495	hypothetical protein	TC	493986	494984	+	2.A.20.1.7
MGYG000000227_00496	Stage II sporulation protein SA	TC	495097	495843	+	9.A.10.1.1
MGYG000000227_00497	Stage II sporulation protein SB	null	495840	496016	+	SpoIISB_antitox
MGYG000000227_00498	Hexuronate transporter	TC	496316	497584	-	2.A.1.14.33
Protein ID	Protein Name	Type	Start	End	Strand	Signature